Polyprion americanus

Access to genome browser and other tools for the genome - Pending
Resampling required
Sample collected
Sample acquired
Data generation
In assembly
Submitted
Insdc open
  • Scientific name accepted: Polyprion americanus
  • Authority: (Bloch & Schneider, 1801)
  • Phylum: Chordata
  • Genus: Polyprion
  • Species: Polyprion americanus
  • Sex: Male
  • Ploidy: Unknown
  • Common name: No common name known
  • Collect event: MI-DIVESEA_ENDOUME
  • Coordinator(s): Thierry Perez
  • Operator(s): CARRODANO Gérard
  • Taxonomist(s): David Carrodano
  • Date: Sept. 1, 2024
  • Site (sea): Mediterranean Sea
  • Site (region): Banc des Blauquières
  • Latitude: 43.0371251801
  • Longitude: 5.6235648396

World occurrences from GBIF

  • ENA BioProject of the sequencing raw data: PRJEB104756
  • ENA BioProject of the genome assembly: PRJEB104757
  • Assembly accession: GCA_977971305
  • EAR report with genome assembly metrics: PDF
  • Assembly ploidy: Not communicated
  • Sequencing: Not communicated
  • Size: 767.34 Mbp
  • GC content: 40.4%
  • Number of chromosomes: 24
  • Number of scaffolds: 47
  • N50 of scaffolds: 33.31 Mbp
  • L50 of scaffolds: 11
  • Number of contigs: 70
  • N50 of contigs: 31.52 Mbp
  • L50 of contigs: 11
  • Protein-coding genes: Undetermined
  • Gene length (average): Undetermined
  • Gene length (median): Undetermined
  • CDS length (average): Undetermined
  • CDS length (median): Undetermined
  • CDS proportion (genome): Undetermined
  • Genes without introns: Undetermined
  • Number of contigs with at least one gene (genome): Undetermined
  • Number of contigs with at least one gene (bases): Undetermined

BUSCO structural annotations completeness

BUSCO v6.0.0 (euk_genome_min, miniprot), lineage: eukaryota_odb12 (genomes: 456, BUSCOs: 129)v6.0.0 (euk_genome_min, miniprot), lineage: eukaryota_odb12 (genomes: 456, BUSCOs: 129)

Genome

  • Single-copy genes: Undetermined
  • Duplicated genes: Undetermined
  • Fragmented genes: Undetermined
  • Missing genes: Undetermined

Proteins

  • Single-copy genes: Undetermined
  • Duplicated genes: Undetermined
  • Fragmented genes: Undetermined
  • Missing genes: Undetermined